Pseudomonas syringae pv. tomato DC3000, PSPTO_2359 (allD)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2359
NCBI Old Locus Tag	PSPTO2359
Name	allD Synonym: PSPTO2359
Replicon	chromosome
Genomic location	2613769 - 2614800 (+ strand)

Cross-References

RefSeq	NP_792175.1
GI	28869556
Entrez	1184010
INSDC	AAO55870.1
NCBI Locus Tag	PSPTO_2359
NCBI Old Locus Tag	PSPTO2359
UniParc	UPI0000008B61
UniProtKB Acc	Q883J8
UniProtKB ID	Q883J8_PSESM
UniRef100	UniRef100_Q883J8
UniRef50	UniRef50_Q5FB93
UniRef90	UniRef90_Q4U331

Product

Feature Type	CDS
Coding Frame	1
Product Name	ureidoglycolate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.72
Kyte-Doolittle Hydrophobicity Value	0.060
Molecular Weight (kDa)	36.2
Isoelectric Point (pI)	6.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
2CWF	OXIDOREDUCTASE	06/20/05	Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH	Pseudomonas syringae pv. tomato	1.8	X-RAY DIFFRACTION	98.8
1WTJ	OXIDOREDUCTASE	11/24/04	Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae pvar.tomato	Pseudomonas syringae pv. tomato	1.55	X-RAY DIFFRACTION	98.8
2CWH	OXIDOREDUCTASE	06/20/05	Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate	Pseudomonas syringae pv. tomato	1.7	X-RAY DIFFRACTION	98.8

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 206 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001204 (489 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2359 Search term: allD Search term: ureidoglycolate dehydrogenase

Human Homologs

References