Pseudomonas syringae pv. tomato DC3000, PSPTO_2554

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2554
NCBI Old Locus Tag	PSPTO2554
Name	Synonym: PSPTO2554
Replicon	chromosome
Genomic location	2820042 - 2823548 (+ strand)

Cross-References

RefSeq	NP_792364.1
GI	28869745
Entrez	1184206
INSDC	AAO56059.1
NCBI Locus Tag	PSPTO_2554
NCBI Old Locus Tag	PSPTO2554
UniParc	UPI0000008C14
UniProtKB Acc	Q882S1
UniProtKB ID	Q882S1_PSESM
UniRef100	UniRef100_Q882S1
UniRef50	UniRef50_G8Q735
UniRef90	UniRef90_Q882S1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	12.68
Kyte-Doolittle Hydrophobicity Value	-0.256
Molecular Weight (kDa)	131.6
Isoelectric Point (pI)	8.90

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 103 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015811 (19 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2554

Human Homologs

References