Pseudomonas syringae pv. tomato DC3000, PSPTO_2816

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2816
NCBI Old Locus Tag	PSPTO2816
Name	Synonym: PSPTO2816
Replicon	chromosome
Genomic location	3141276 - 3141866 (+ strand)

Cross-References

RefSeq	NP_792620.1
GI	28870001
Entrez	1184470
INSDC	AAO56315.1
NCBI Locus Tag	PSPTO_2816
NCBI Old Locus Tag	PSPTO2816
UniParc	UPI0000008D12
UniProtKB Acc	Q881R7
UniProtKB ID	Q881R7_PSESM
UniRef100	UniRef100_Q881R7
UniRef50	UniRef50_Q881R7
UniRef90	UniRef90_Q881R7

Product

Feature Type	CDS
Coding Frame	1
Product Name	alkylhydroperoxidase AhpD domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.62
Kyte-Doolittle Hydrophobicity Value	0.014
Molecular Weight (kDa)	21.7
Isoelectric Point (pI)	4.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 140 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018038 (23 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2816 Search term: alkylhydroperoxidase AhpD domain-containing protein

Human Homologs

References