Pseudomonas syringae pv. tomato DC3000, PSPTO_2875

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2875
NCBI Old Locus Tag	PSPTO2875
Name	Synonym: PSPTO2875
Replicon	chromosome
Genomic location	3238149 - 3238841 (+ strand)

Cross-References

RefSeq	NP_792676.1
GI	28870057
Entrez	1184529
INSDC	AAO56371.1
NCBI Locus Tag	PSPTO_2875
NCBI Old Locus Tag	PSPTO2875
UniParc	UPI0000008D46
UniProtKB Acc	Q881L4
UniProtKB ID	Q881L4_PSESM
UniRef100	UniRef100_Q881L4
UniRef50	UniRef50_A0A085HRI6
UniRef90	UniRef90_Q881L4

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.62
Kyte-Doolittle Hydrophobicity Value	0.182
Molecular Weight (kDa)	24.7
Isoelectric Point (pI)	5.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000072 (411 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2875 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000467186 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 2.1e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000402814 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 2.1e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000467271 ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38] E-value: 2.1e-13 Percent Identity: 32.1

References