Pseudomonas syringae pv. tomato DC3000, PSPTO_2957 (medH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2957
NCBI Old Locus TagPSPTO2957
Name
medH
Synonym: PSPTO2957
Replicon chromosome
Genomic location 3324119 - 3325273 (- strand)

Cross-References

RefSeq NP_792754.1
GI 28870135
Entrez 1184611
INSDC AAO56449.1
NCBI Locus Tag PSPTO_2957
NCBI Old Locus Tag PSPTO2957
UniParc UPI0000008D93
UniProtKB Acc Q881D7
UniProtKB ID Q881D7_PSESM
UniRef100 UniRef100_Q881D7
UniRef50 UniRef50_Q881D7
UniRef90 UniRef90_Q881D7

Product

Feature Type CDS
Coding Frame 1
Product Name
methanol dehydrogenase, NAD-dependent
Synonyms
Evidence for Translation
Charge (pH 7) -2.09
Kyte-Doolittle Hydrophobicity Value 0.037
Molecular Weight (kDa) 41.4
Isoelectric Point (pI) 6.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 479 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001106 (1358 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2957
Search term: medH

Human Homologs

Ensembl 110, assembly GRCh38.p14
alcohol dehydrogenase iron containing 1 [Source:HGNC Symbol;Acc:HGNC:16354]
E-value: 2.0e-24
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
alcohol dehydrogenase iron containing 1 [Source:HGNC Symbol;Acc:HGNC:16354]
E-value: 2.0e-24
Percent Identity: 28.6

References

No references are associated with this feature.