Pseudomonas syringae pv. tomato DC3000, PSPTO_3020

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3020
NCBI Old Locus Tag	PSPTO3020
Name	Synonym: PSPTO3020
Replicon	chromosome
Genomic location	3395538 - 3396407 (- strand)

Cross-References

RefSeq	NP_792815.1
GI	28870196
Entrez	1184676
INSDC	AAO56510.1
NCBI Locus Tag	PSPTO_3020
NCBI Old Locus Tag	PSPTO3020
UniParc	UPI0000008DCC
UniProtKB Acc	Q880Y0
UniProtKB ID	Q880Y0_PSESM
UniRef100	UniRef100_Q880Y0
UniRef50	UniRef50_I3TR48
UniRef90	UniRef90_Q880Y0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-13.28
Kyte-Doolittle Hydrophobicity Value	0.271
Molecular Weight (kDa)	30.8
Isoelectric Point (pI)	4.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 272 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018164 (29 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3020

Human Homologs

References