Pseudomonas syringae pv. tomato DC3000, PSPTO_3198

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3198
NCBI Old Locus Tag	PSPTO3198
Name	Synonym: PSPTO3198
Replicon	chromosome
Genomic location	3591973 - 3592959 (+ strand)

Cross-References

RefSeq	NP_792986.1
GI	28870367
Entrez	1184855
INSDC	AAO56681.1
NCBI Locus Tag	PSPTO_3198
NCBI Old Locus Tag	PSPTO3198
UniParc	UPI0000008E75
UniProtKB Acc	Q880G2
UniProtKB ID	Q880G2_PSESM
UniRef100	UniRef100_Q880G2
UniRef50	UniRef50_A9IC25
UniRef90	UniRef90_Q880G2

Product

Feature Type	CDS
Coding Frame	1
Product Name	luciferase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.52
Kyte-Doolittle Hydrophobicity Value	-0.182
Molecular Weight (kDa)	36.6
Isoelectric Point (pI)	7.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 175 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001144 (401 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3198 Search term: luciferase family protein

Human Homologs

References