Pseudomonas syringae pv. tomato DC3000, PSPTO_3392

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3392
NCBI Old Locus TagPSPTO3392
Name
Synonym: PSPTO3392
Replicon chromosome
Genomic location 3832938 - 3833702 (- strand)

Cross-References

RefSeq NP_793175.1
GI 28870556
Entrez 1185052
INSDC AAO56870.1
NCBI Locus Tag PSPTO_3392
NCBI Old Locus Tag PSPTO3392
UniParc UPI0000008F29
UniProtKB Acc Q87ZN2
UniProtKB ID Q87ZN2_PSESM
UniRef100 UniRef100_Q87ZN2
UniRef50 UniRef50_Q88ID6
UniRef90 UniRef90_Q87ZN2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.20
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 27.0
Isoelectric Point (pI) 9.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 56 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000609 (301 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3392

Human Homologs

References

No references are associated with this feature.