Pseudomonas syringae pv. tomato DC3000, PSPTO_3935

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3935
NCBI Old Locus Tag	PSPTO3935
Name	Synonym: PSPTO3935
Replicon	chromosome
Genomic location	4446907 - 4447263 (- strand)

Cross-References

RefSeq	NP_793704.1
GI	28871085
Entrez	1185609
INSDC	AAO57399.1
NCBI Locus Tag	PSPTO_3935
NCBI Old Locus Tag	PSPTO3935
UniParc	UPI000000912C
UniProtKB Acc	Q87Y70
UniProtKB ID	Q87Y70_PSESM
UniRef100	UniRef100_Q87Y70
UniRef50	UniRef50_Q87Y70
UniRef90	UniRef90_Q87Y70

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-12.01
Kyte-Doolittle Hydrophobicity Value	-0.326
Molecular Weight (kDa)	13.1
Isoelectric Point (pI)	3.83

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018503 (13 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3935

Human Homologs

References