Pseudomonas syringae pv. tomato DC3000, PSPTO_3991

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3991
NCBI Old Locus TagPSPTO3991
Name
Synonym: PSPTO3991
Replicon chromosome
Genomic location 4499143 - 4501785 (+ strand)

Cross-References

RefSeq NP_793755.1
GI 28871136
Entrez 1185669
INSDC AAO57450.1
NCBI Locus Tag PSPTO_3991
NCBI Old Locus Tag PSPTO3991
UniParc UPI000000915D
UniProtKB Acc Q87Y21
UniProtKB ID Q87Y21_PSESM
UniRef100 UniRef100_Q87Y21
UniRef50 UniRef50_A0A0B7D7G3
UniRef90 UniRef90_Q87Y21

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 16.41
Kyte-Doolittle Hydrophobicity Value 0.458
Molecular Weight (kDa) 96.4
Isoelectric Point (pI) 9.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 192 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000886 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3991
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.