Pseudomonas syringae pv. tomato DC3000, PSPTO_4021

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4021
NCBI Old Locus Tag	PSPTO4021
Name	Synonym: PSPTO4021
Replicon	chromosome
Genomic location	4532376 - 4533086 (+ strand)

Cross-References

RefSeq	NP_793783.1
GI	28871164
Entrez	1185700
INSDC	AAO57478.1
NCBI Locus Tag	PSPTO_4021
NCBI Old Locus Tag	PSPTO4021
UniParc	UPI0000009173
UniProtKB Acc	Q87XZ9
UniProtKB ID	Q87XZ9_PSESM
UniRef100	UniRef100_A0A038GJR1
UniRef50	UniRef50_Q48FA5
UniRef90	UniRef90_Q48FA5

Product

Feature Type	CDS
Coding Frame	1
Product Name	S4 domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.38
Kyte-Doolittle Hydrophobicity Value	-0.236
Molecular Weight (kDa)	26.3
Isoelectric Point (pI)	9.83

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001070 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4021 Search term: S4 domain-containing protein

Human Homologs

References