Pseudomonas syringae pv. tomato DC3000, PSPTO_4111

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4111
NCBI Old Locus Tag	PSPTO4111
Name	Synonym: PSPTO4111
Replicon	chromosome
Genomic location	4635168 - 4635935 (+ strand)

Cross-References

RefSeq	NP_793872.1
GI	28871253
Entrez	1185791
INSDC	AAO57567.1
NCBI Locus Tag	PSPTO_4111
NCBI Old Locus Tag	PSPTO4111
UniParc	UPI00000091C7
UniProtKB Acc	Q87XR5
UniProtKB ID	Q87XR5_PSESM
UniRef100	UniRef100_Q87XR5
UniRef50	UniRef50_P21629
UniRef90	UniRef90_S3MK68

Product

Feature Type	CDS
Coding Frame	1
Product Name	leucine/isoleucine/valine transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7)	3.62
Kyte-Doolittle Hydrophobicity Value	-0.100
Molecular Weight (kDa)	28.1
Isoelectric Point (pI)	8.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001033 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4111 Search term: leucine/isoleucine/valine transporter ATP-binding subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000272895 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 5.2e-21 Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14	ENSP00000374312 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 5.2e-21 Percent Identity: 28.6

References