Pseudomonas syringae pv. tomato DC3000, PSPTO_4120

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4120
NCBI Old Locus Tag	PSPTO4120
Name	Synonym: PSPTO4120
Replicon	chromosome
Genomic location	4643754 - 4645898 (- strand)

Cross-References

RefSeq	NP_793881.1
GI	28871262
Entrez	1185800
INSDC	AAO57576.1
NCBI Locus Tag	PSPTO_4120
NCBI Old Locus Tag	PSPTO4120
UniParc	UPI00000091D0
UniProtKB Acc	Q87XQ6
UniProtKB ID	Q87XQ6_PSESM
UniRef100	UniRef100_Q87XQ6
UniRef50	UniRef50_Q4KH75
UniRef90	UniRef90_Q4KH75

Product

Feature Type	CDS
Coding Frame	1
Product Name	DinG family ATP-dependent helicase
Synonyms
Evidence for Translation
Charge (pH 7)	-9.83
Kyte-Doolittle Hydrophobicity Value	-0.255
Molecular Weight (kDa)	78.8
Isoelectric Point (pI)	6.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 358 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001007 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4120 Search term: DinG family ATP-dependent helicase

Human Homologs

References