Pseudomonas syringae pv. tomato DC3000, PSPTO_4171 (aatJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4171
NCBI Old Locus TagPSPTO4171
Name
aatJ
Synonym: PSPTO4171
Replicon chromosome
Genomic location 4699577 - 4700503 (+ strand)

Cross-References

RefSeq NP_793932.1
GI 28871313
Entrez 1185851
INSDC AAO57627.1
NCBI Locus Tag PSPTO_4171
NCBI Old Locus Tag PSPTO4171
UniParc UPI0000009202
UniProtKB Acc Q87XK7
UniProtKB ID Q87XK7_PSESM
UniRef100 UniRef100_Q87XK7
UniRef50 UniRef50_P37902
UniRef90 UniRef90_Q4K731

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter substrate-binding protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -0.10
Kyte-Doolittle Hydrophobicity Value -0.240
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 6.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 363 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001277 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4171
Search term: aatJ

Human Homologs

References

Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.
Singh B, Röhm KH
Microbiology (Reading) 2008 Mar;154(Pt 3):797-809
PubMed ID: 18310026