Pseudomonas syringae pv. tomato DC3000, PSPTO_4307 (catF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4307
NCBI Old Locus TagPSPTO4307
Name
catF
Synonym: PSPTO4307
Replicon chromosome
Genomic location 4857791 - 4858990 (- strand)

Cross-References

RefSeq NP_794063.1
GI 28871444
Entrez 1185988
INSDC AAO57758.1
NCBI Locus Tag PSPTO_4307
NCBI Old Locus Tag PSPTO4307
UniParc UPI0000009280
UniProtKB Acc Q87X81
UniProtKB ID Q87X81_PSESM
UniRef100 UniRef100_Q87X81
UniRef50 UniRef50_P0C7L2
UniRef90 UniRef90_G8PXF7

Product

Feature Type CDS
Coding Frame 1
Product Name
3-oxoadipyl-CoA thiolase
Synonyms
Evidence for Translation
Charge (pH 7) -4.66
Kyte-Doolittle Hydrophobicity Value 0.055
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 485 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000227 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4307
Search term: catF

Human Homologs

Ensembl 110, assembly GRCh38.p14
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 7.7e-80
Percent Identity: 43.2

References

No references are associated with this feature.