Pseudomonas syringae pv. tomato DC3000, PSPTO_4436

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4436
NCBI Old Locus Tag	PSPTO4436
Name	Synonym: PSPTO4436
Replicon	chromosome
Genomic location	5004167 - 5004619 (- strand)

Cross-References

RefSeq	NP_794190.1
GI	28871571
Entrez	1186117
INSDC	AAO57885.1
NCBI Locus Tag	PSPTO_4436
NCBI Old Locus Tag	PSPTO4436
UniParc	UPI00000092FB
UniProtKB Acc	Q87WV7
UniProtKB ID	Q87WV7_PSESM
UniRef100	UniRef100_Q87WV7
UniRef50	UniRef50_Q87WV7
UniRef90	UniRef90_Q87WV7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.37
Kyte-Doolittle Hydrophobicity Value	-0.211
Molecular Weight (kDa)	17.5
Isoelectric Point (pI)	10.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 112 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018665 (79 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4436

Human Homologs

References