Pseudomonas syringae pv. tomato DC3000, PSPTO_5048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5048
NCBI Old Locus TagPSPTO5048
Name
Synonym: PSPTO5048
Replicon chromosome
Genomic location 5747467 - 5748057 (+ strand)

Cross-References

RefSeq NP_794781.1
GI 28872162
Entrez 1186733
INSDC AAO58476.1
NCBI Locus Tag PSPTO_5048
NCBI Old Locus Tag PSPTO5048
UniParc UPI000000952D
UniProtKB Acc Q87V91
UniProtKB ID Q87V91_PSESM
UniRef100 UniRef100_Q87V91
UniRef50 UniRef50_Q87V91
UniRef90 UniRef90_Q87V91

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.40
Kyte-Doolittle Hydrophobicity Value 1.183
Molecular Weight (kDa) 21.6
Isoelectric Point (pI) 9.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 271 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000383 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5048

Human Homologs

References

No references are associated with this feature.