Pseudomonas syringae pv. tomato DC3000, PSPTO_5055

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5055
NCBI Old Locus Tag	PSPTO5055
Name	Synonym: PSPTO5055
Replicon	chromosome
Genomic location	5754554 - 5756578 (- strand)

Cross-References

RefSeq	NP_794788.1
GI	28872169
Entrez	1186740
INSDC	AAO58483.1
NCBI Locus Tag	PSPTO_5055
NCBI Old Locus Tag	PSPTO5055
UniParc	UPI0000009534
UniProtKB Acc	Q87V84
UniProtKB ID	Q87V84_PSESM
UniRef100	UniRef100_Q87V84
UniRef50	UniRef50_Q4ZP11
UniRef90	UniRef90_Q87V84

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.12
Kyte-Doolittle Hydrophobicity Value	-0.538
Molecular Weight (kDa)	75.0
Isoelectric Point (pI)	6.56

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000258 (272 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5055

Human Homologs

References