Pseudomonas syringae pv. tomato DC3000, PSPTO_5218

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5218
NCBI Old Locus TagPSPTO5218
Name
Synonym: PSPTO5218
Replicon chromosome
Genomic location 5940101 - 5940682 (- strand)

Cross-References

RefSeq NP_794949.1
GI 28872330
Entrez 1186903
INSDC AAO58644.1
NCBI Locus Tag PSPTO_5218
NCBI Old Locus Tag PSPTO5218
UniParc UPI00000095D0
UniProtKB Acc Q87US8
UniProtKB ID Q87US8_PSESM
UniRef100 UniRef100_Q87US8
UniRef50 UniRef50_D7HUR0
UniRef90 UniRef90_D7HUR0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.09
Kyte-Doolittle Hydrophobicity Value -0.446
Molecular Weight (kDa) 21.8
Isoelectric Point (pI) 7.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 121 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000200 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5218

Human Homologs

References

No references are associated with this feature.