Pseudomonas syringae pv. tomato DC3000, PSPTO_5285

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5285
NCBI Old Locus Tag	PSPTO5285
Name	Synonym: PSPTO5285
Replicon	chromosome
Genomic location	6011469 - 6011948 (- strand)

Cross-References

RefSeq	NP_795016.1
GI	28872397
Entrez	1186970
INSDC	AAO58711.1
NCBI Locus Tag	PSPTO_5285
NCBI Old Locus Tag	PSPTO5285
UniParc	UPI0000009613
UniProtKB Acc	Q87UL1
UniProtKB ID	RPPH_PSESM
UniRef100	UniRef100_Q48CC6
UniRef50	UniRef50_A6UYD9
UniRef90	UniRef90_A6UYD9

Product

Feature Type	CDS
Coding Frame	1
Product Name	mutT/nudix family protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.41
Kyte-Doolittle Hydrophobicity Value	-0.603
Molecular Weight (kDa)	18.9
Isoelectric Point (pI)	9.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 255 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000328 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5285 Search term: mutT/nudix family protein

Human Homologs

References