Pseudomonas syringae pv. tomato DC3000, PSPTO_5540

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5540
NCBI Old Locus Tag	PSPTO5540
Name	Synonym: PSPTO5540
Replicon	chromosome
Genomic location	6308865 - 6309485 (+ strand)

Cross-References

RefSeq	NP_795264.1
GI	28872645
Entrez	1187232
INSDC	AAO58959.1
NCBI Locus Tag	PSPTO_5540
NCBI Old Locus Tag	PSPTO5540
UniParc	UPI00000096FE
UniProtKB Acc	Q87TX7
UniProtKB ID	Q87TX7_PSESM
UniRef100	UniRef100_Q87TX7
UniRef50	UniRef50_S9QJT5
UniRef90	UniRef90_Q87TX7

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	3.65
Kyte-Doolittle Hydrophobicity Value	-0.114
Molecular Weight (kDa)	23.0
Isoelectric Point (pI)	9.14

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 218 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003032 (433 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5540 Search term: acyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000401410 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000378875 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000405565 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000382721 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000364245 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000364248 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000378877 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000406614 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000382725 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000372782 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000415015 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000412805 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000382726 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000410831 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000404106 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000405864 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000412304 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000378874 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000387810 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000406582 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000388090 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000382723 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000395613 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000382728 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14	ENSP00000337463 1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:324] E-value: 1.4e-05 Percent Identity: 38.5

References