Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0021 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0021
Name
def
Replicon chromosome
Genomic location 26516 - 27022 (- strand)

Cross-References

RefSeq YP_272335.1
GI 71737781
EC Number 3.5.1.88
Entrez 3560201
INSDC AAZ37545.1
NCBI Locus Tag PSPPH_0021
UniParc UPI0000575026
UniProtKB Acc Q48QI1
UniProtKB ID Q48QI1_PSE14
UniRef100 UniRef100_Q48QI1
UniRef50 UniRef50_Q9I7A8
UniRef90 UniRef90_Q88B43

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -4.13
Kyte-Doolittle Hydrophobicity Value -0.352
Molecular Weight (kDa) 19.3
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000019 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0021
Search term: def

Human Homologs

References

No references are associated with this feature.