Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0030 (betC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0030
Name
betC
Replicon chromosome
Genomic location 35724 - 37229 (- strand)

Cross-References

RefSeq YP_272344.1
GI 71734150
EC Number 3.1.6.6
Entrez 3556452
INSDC AAZ33914.1
NCBI Locus Tag PSPPH_0030
UniParc UPI000057502F
UniProtKB Acc Q48QH2
UniProtKB ID Q48QH2_PSE14
UniRef100 UniRef100_Q48QH2
UniRef50 UniRef50_Q48QH2
UniRef90 UniRef90_Q48QH2

Product

Feature Type CDS
Coding Frame 1
Product Name
choline sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -5.36
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 56.9
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 270 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0030
Search term: betC
Search term: choline sulfatase

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 2.8e-34
Percent Identity: 28.3

References

No references are associated with this feature.