Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0116

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0116
Name
Replicon chromosome
Genomic location 133108 - 134130 (- strand)

Cross-References

RefSeq YP_272427.1
GI 71734711
Entrez 3557028
NCBI Locus Tag PSPPH_0116

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -1.68
Kyte-Doolittle Hydrophobicity Value -0.419
Molecular Weight (kDa) 38263.1
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019656 (13 members)
Putative Inparalogs 1 predicted inparalogs
lipoprotein (PSPPH_0115) 59.5% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0116
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.