Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0681

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0681
Name
Replicon chromosome
Genomic location 795599 - 796375 (- strand)

Cross-References

RefSeq YP_272979.1
GI 71737252
Entrez 3559655
INSDC AAZ37016.1
NCBI Locus Tag PSPPH_0681
UniParc UPI0000575285
UniProtKB Acc Q48NP0
UniProtKB ID Q48NP0_PSE14
UniRef100 UniRef100_F3ECG2
UniRef50 UniRef50_Q4K509
UniRef90 UniRef90_D7HVA7

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase/reductase oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) 5.56
Kyte-Doolittle Hydrophobicity Value 0.202
Molecular Weight (kDa) 28.3
Isoelectric Point (pI) 8.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 648 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000637 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0681

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid dehydrogenase like 1 [Source:HGNC Symbol;Acc:HGNC:16475]
E-value: 1.7e-16
Percent Identity: 31.7

References

No references are associated with this feature.