Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1790
Name
Replicon chromosome
Genomic location 2095695 - 2097464 (+ strand)

Cross-References

RefSeq YP_274024.1
GI 71733404
Entrez 3555687
NCBI Locus Tag PSPPH_1790

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7) 7.87
Kyte-Doolittle Hydrophobicity Value 0.285
Molecular Weight (kDa) 64250.0
Isoelectric Point (pI) 9.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001073 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1790

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.7e-94
Percent Identity: 36.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.7e-94
Percent Identity: 36.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.7e-94
Percent Identity: 36.8

References

No references are associated with this feature.