Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2967

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2967
Name
Replicon chromosome
Genomic location 3444607 - 3445503 (- strand)

Cross-References

RefSeq YP_275148.1
GI 71734420
Entrez 3556727
INSDC AAZ34184.1
NCBI Locus Tag PSPPH_2967
UniParc UPI0000575A87
UniProtKB Acc Q48HI5
UniProtKB ID Q48HI5_PSE14
UniRef100 UniRef100_Q48HI5
UniRef50 UniRef50_Q4K786
UniRef90 UniRef90_Q48HI5

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.01
Kyte-Doolittle Hydrophobicity Value 0.182
Molecular Weight (kDa) 32.1
Isoelectric Point (pI) 7.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 388 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000055 (3840 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2967

Human Homologs

References

No references are associated with this feature.