Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3122

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3122
Name
Replicon chromosome
Genomic location 3623017 - 3624006 (- strand)

Cross-References

RefSeq YP_275292.1
GI 71736546
Entrez 3558926
INSDC AAZ36310.1
NCBI Locus Tag PSPPH_3122
UniParc UPI0000575B10
UniProtKB Acc Q48H41
UniProtKB ID Q48H41_PSE14
UniRef100 UniRef100_Q48H41
UniRef50 UniRef50_Q48H41
UniRef90 UniRef90_Q48H41

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.28
Kyte-Doolittle Hydrophobicity Value 0.082
Molecular Weight (kDa) 35543.8
Isoelectric Point (pI) 8.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 305 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000800 (1482 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3122

Human Homologs

References

No references are associated with this feature.