Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3296

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3296
Name
Replicon chromosome
Genomic location 3819994 - 3820662 (- strand)

Cross-References

RefSeq YP_275455.1
GI 71733773
Entrez 3556066
INSDC AAZ33537.1
NCBI Locus Tag PSPPH_3296
UniParc UPI0000575BAE
UniProtKB Acc Q48GM8
UniProtKB ID Q48GM8_PSE14
UniRef100 UniRef100_F3EES4
UniRef50 UniRef50_A0A0B7DFE2
UniRef90 UniRef90_Q4ZR14

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate lyase
Synonyms
Evidence for Translation
Charge (pH 7) -0.56
Kyte-Doolittle Hydrophobicity Value -0.329
Molecular Weight (kDa) 24.8
Isoelectric Point (pI) 6.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001125 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3296
Search term: alginate lyase

Human Homologs

References

No references are associated with this feature.