Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3726

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3726
Name
Replicon chromosome
Genomic location 4273492 - 4274316 (- strand)

Cross-References

RefSeq YP_275868.1
GI 71737240
Entrez 3559643
INSDC AAZ37004.1
NCBI Locus Tag PSPPH_3726
UniParc UPI0000575D2D
UniProtKB Acc Q48FG8
UniProtKB ID TTCA_PSE14
UniRef100 UniRef100_Q48FG8
UniRef50 UniRef50_Q885Z7
UniRef90 UniRef90_Q885Z7

Product

Feature Type CDS
Coding Frame 1
Product Name
C32 tRNA thiolase
Synonyms
Evidence for Translation
Charge (pH 7) 1.26
Kyte-Doolittle Hydrophobicity Value -0.253
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 7.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 404 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001150 (540 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3726
Search term: C32 tRNA thiolase

Human Homologs

References

No references are associated with this feature.