Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3779

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3779
Name
Replicon chromosome
Genomic location 4329114 - 4329335 (+ strand)

Cross-References

RefSeq YP_275919.1
GI 71734613
Entrez 3556930
INSDC AAZ34377.1
NCBI Locus Tag PSPPH_3779
UniParc UPI0000009156
UniProtKB Acc Q48FB8
UniProtKB ID Q48FB8_PSE14
UniRef100 UniRef100_Q4ZWL8
UniRef50 UniRef50_C3JYT6
UniRef90 UniRef90_Q4ZWL8

Product

Feature Type CDS
Coding Frame 1
Product Name
cold shock domain-contain protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.47
Kyte-Doolittle Hydrophobicity Value -0.492
Molecular Weight (kDa) 8.3
Isoelectric Point (pI) 10.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 493 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000926 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3779

Human Homologs

References

No references are associated with this feature.