Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3951 (lepA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3951
Name
lepA
Replicon chromosome
Genomic location 4512549 - 4514336 (- strand)

Cross-References

RefSeq YP_276087.1
GI 71734407
Entrez 3556713
INSDC AAZ34171.1
NCBI Locus Tag PSPPH_3951
UniParc UPI0000575DF5
UniProtKB Acc Q48EV0
UniProtKB ID LEPA_PSE14
UniRef100 UniRef100_Q48EV0
UniRef50 UniRef50_O67618
UniRef90 UniRef90_Q87XF8

Product

Feature Type CDS
Coding Frame 1
Product Name
GTP-binding protein LepA
Synonyms
Evidence for Translation
Charge (pH 7) -10.57
Kyte-Doolittle Hydrophobicity Value -0.067
Molecular Weight (kDa) 65.9
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000741 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3951
Search term: lepA

Human Homologs

Ensembl 110, assembly GRCh38.p14
GTP binding elongation factor GUF1 [Source:HGNC Symbol;Acc:HGNC:25799]
E-value: 4.0e-173
Percent Identity: 49.2

References

No references are associated with this feature.