Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3956 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3956
Name
nadB
Replicon chromosome
Genomic location 4518911 - 4520527 (+ strand)

Cross-References

RefSeq YP_276092.1
GI 71736686
EC Number 1.4.3.16
Entrez 3559070
INSDC AAZ36450.1
NCBI Locus Tag PSPPH_3956
UniParc UPI0000575DF9
UniProtKB Acc Q48EU5
UniProtKB ID Q48EU5_PSE14
UniRef100 UniRef100_Q48EU5
UniRef50 UniRef50_P10902
UniRef90 UniRef90_D7I4M4

Product

Feature Type CDS
Coding Frame 1
Product Name
L-aspartate oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -17.47
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 59.6
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000735 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3956
Search term: nadB

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate dehydrogenase complex flavoprotein subunit A [Source:HGNC Symbol;Acc:HGNC:10680]
E-value: 2.3e-58
Percent Identity: 31.7

References

No references are associated with this feature.