Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4722 (comF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4722
Name
comF
Replicon chromosome
Genomic location 5359180 - 5359914 (+ strand)

Cross-References

RefSeq YP_276823.1
GI 71734602
Entrez 3556918
INSDC AAZ34366.1
NCBI Locus Tag PSPPH_4722
UniParc UPI0000576085
UniProtKB Acc Q48CS0
UniProtKB ID Q48CS0_PSE14
UniRef100 UniRef100_Q48CS0
UniRef50 UniRef50_J2TN38
UniRef90 UniRef90_Q48CS0

Product

Feature Type CDS
Coding Frame 1
Product Name
competence protein ComF
Synonyms
Evidence for Translation
Charge (pH 7) 7.04
Kyte-Doolittle Hydrophobicity Value -0.313
Molecular Weight (kDa) 27626.8
Isoelectric Point (pI) 8.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000478 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4722
Search term: comF

Human Homologs

References

No references are associated with this feature.