Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4750 (glyA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4750
Name
glyA
Replicon chromosome
Genomic location 5392609 - 5393862 (+ strand)

Cross-References

RefSeq YP_276850.1
GI 71737346
EC Number 2.1.2.1
Entrez 3559749
INSDC AAZ37110.1
NCBI Locus Tag PSPPH_4750
UniParc UPI000057609C
UniProtKB Acc Q48CP3
UniProtKB ID GLYA2_PSE14
UniRef100 UniRef100_Q48CP3
UniRef50 UniRef50_P9WGI9
UniRef90 UniRef90_Q48CP3

Product

Feature Type CDS
Coding Frame 1
Product Name
serine hydroxymethyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -7.54
Kyte-Doolittle Hydrophobicity Value -0.123
Molecular Weight (kDa) 44.9
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 654 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003094 (1150 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4750
Search term: glyA

Human Homologs

Ensembl 110, assembly GRCh38.p14
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value: 6.4e-93
Percent Identity: 47.3
Ensembl 110, assembly GRCh38.p14
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value: 6.4e-93
Percent Identity: 47.3
Ensembl 110, assembly GRCh38.p14
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value: 6.4e-93
Percent Identity: 47.3
Ensembl 110, assembly GRCh38.p14
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value: 6.4e-93
Percent Identity: 47.3

References

No references are associated with this feature.