Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4788

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4788
Name
Replicon chromosome
Genomic location 5434180 - 5434842 (- strand)

Cross-References

RefSeq YP_276888.1
GI 71737186
Entrez 3559586
INSDC AAZ36950.1
NCBI Locus Tag PSPPH_4788
UniParc UPI00005760BE
UniProtKB Acc Q48CK5
UniProtKB ID Q48CK5_PSE14
UniRef100 UniRef100_Q48CK5
UniRef50 UniRef50_Q4K4B1
UniRef90 UniRef90_Q48CK5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.89
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 25.9
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 128 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000358 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4788

Human Homologs

References

No references are associated with this feature.