Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4857

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4857
Name
Replicon chromosome
Genomic location 5519038 - 5521353 (- strand)

Cross-References

RefSeq YP_276950.1
GI 71736035
Entrez 3558399
INSDC AAZ35799.1
NCBI Locus Tag PSPPH_4857
UniParc UPI00005760F9
UniProtKB Acc Q48CE3
UniProtKB ID Q48CE3_PSE14
UniRef100 UniRef100_Q48CE3
UniRef50 UniRef50_Q8PHP8
UniRef90 UniRef90_Q4ZLW9

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -18.87
Kyte-Doolittle Hydrophobicity Value -0.449
Molecular Weight (kDa) 84477.6
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 314 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000190 (1069 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4857

Human Homologs

References

No references are associated with this feature.