Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4974

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4974
Name
Replicon chromosome
Genomic location 5642993 - 5643544 (+ strand)

Cross-References

RefSeq YP_277059.1
GI 71737493
Entrez 3559901
INSDC AAZ37257.1
NCBI Locus Tag PSPPH_4974
UniParc UPI000057615F
UniProtKB Acc Q48C34
UniProtKB ID Q48C34_PSE14
UniRef100 UniRef100_Q48C34
UniRef50 UniRef50_Q48C34
UniRef90 UniRef90_Q48C34

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.31
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 20832.7
Isoelectric Point (pI) 5.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014749 (18 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4974

Human Homologs

References

No references are associated with this feature.