Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_5085
Name
Replicon chromosome
Genomic location 5769488 - 5770177 (+ strand)

Cross-References

RefSeq YP_277167.1
GI 71734856
Entrez 3557178
INSDC AAZ34620.1
NCBI Locus Tag PSPPH_5085
UniParc UPI00005761C7
UniProtKB Acc Q48BS8
UniProtKB ID Q48BS8_PSE14
UniRef100 UniRef100_Q48BS8
UniRef50 UniRef50_D7I6K8
UniRef90 UniRef90_D7I6K8

Product

Feature Type CDS
Coding Frame 1
Product Name
HAD family hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -12.62
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 25.2
Isoelectric Point (pI) 4.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000546 (754 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_5085

Human Homologs

Ensembl 110, assembly GRCh38.p14
pseudouridine 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:16818]
E-value: 1.5e-48
Percent Identity: 46.1

References

No references are associated with this feature.