Pseudomonas fulva 12-X, Psefu_0004

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_0004
Name
Replicon chromosome
Genomic location 3921 - 6338 (+ strand)

Cross-References

RefSeq YP_004472085.1
GI 333898212
EC Number 5.99.1.3
Entrez 10655941
INSDC AEF19991.1
NCBI Locus Tag Psefu_0004
UniParc UPI00020CC438
UniProtKB Acc F6ABW2
UniProtKB ID F6ABW2_PSEF1
UniRef100 UniRef100_F6ABW2
UniRef50 UniRef50_P13364
UniRef90 UniRef90_F6ABW2

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -15.24
Kyte-Doolittle Hydrophobicity Value -0.446
Molecular Weight (kDa) 90317.6
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_0004

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 3.2e-32
Percent Identity: 25.7

References

No references are associated with this feature.