Pseudomonas fulva 12-X, Psefu_0042

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_0042
Name
Replicon chromosome
Genomic location 44722 - 46038 (- strand)

Cross-References

RefSeq YP_004472123.1
GI 333898250
Entrez 10658787
INSDC AEF20029.1
NCBI Locus Tag Psefu_0042
UniParc UPI00020CC557
UniProtKB Acc F6ACM2
UniProtKB ID F6ACM2_PSEF1
UniRef100 UniRef100_F6ACM2
UniRef50 UniRef50_Q88B41
UniRef90 UniRef90_F6ACM2

Product

Feature Type CDS
Coding Frame 1
Product Name
sun protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.42
Kyte-Doolittle Hydrophobicity Value -0.134
Molecular Weight (kDa) 47759.3
Isoelectric Point (pI) 7.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_0042
Search term: sun protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.8e-28
Percent Identity: 31.8

References

No references are associated with this feature.