Pseudomonas fulva 12-X, Psefu_0613

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_0613
Name
Replicon chromosome
Genomic location 682825 - 683613 (- strand)

Cross-References

RefSeq YP_004472687.1
GI 333898814
Entrez 10658116
INSDC AEF20593.1
NCBI Locus Tag Psefu_0613
UniParc UPI00020CC58B
UniProtKB Acc F6AJ81
UniProtKB ID F6AJ81_PSEF1
UniRef100 UniRef100_F6AJ81
UniRef50 UniRef50_Q4K509
UniRef90 UniRef90_F6AJ81

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) 13.34
Kyte-Doolittle Hydrophobicity Value 0.091
Molecular Weight (kDa) 29000.4
Isoelectric Point (pI) 11.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000637 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_0613

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid dehydrogenase like 1 [Source:HGNC Symbol;Acc:HGNC:16475]
E-value: 3.2e-18
Percent Identity: 31.9

References

No references are associated with this feature.