Pseudomonas fulva 12-X, Psefu_3235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3235
Name
Replicon chromosome
Genomic location 3466253 - 3466942 (- strand)

Cross-References

RefSeq YP_004475291.1
GI 333901418
EC Number 3.1.26.3
Entrez 10658400
INSDC AEF23197.1
NCBI Locus Tag Psefu_3235
UniParc UPI00020CCF06
UniProtKB Acc F6AA58
UniProtKB ID F6AA58_PSEF1
UniRef100 UniRef100_F6AA58
UniRef50 UniRef50_Q4KHT1
UniRef90 UniRef90_A4XSC4

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease 3
Synonyms
Evidence for Translation
Charge (pH 7) -4.36
Kyte-Doolittle Hydrophobicity Value -0.159
Molecular Weight (kDa) 25357.6
Isoelectric Point (pI) 5.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000744 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3235
Search term: ribonuclease 3

Human Homologs

Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-12
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-12
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-12
Percent Identity: 34.4

References

No references are associated with this feature.