Pseudomonas fulva 12-X, Psefu_3946

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_3946
Name
Replicon chromosome
Genomic location 4285742 - 4286554 (+ strand)

Cross-References

RefSeq YP_004475996.1
GI 333902123
Entrez 10655933
INSDC AEF23902.1
NCBI Locus Tag Psefu_3946
UniParc UPI00020CC21C
UniProtKB Acc F6AI76
UniProtKB ID F6AI76_PSEF1
UniRef100 UniRef100_F6AI76
UniRef50 UniRef50_Q47VJ8
UniRef90 UniRef90_F6AI76

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal RNA small subunit methyltransferase A
Synonyms
Evidence for Translation
Charge (pH 7) 3.09
Kyte-Doolittle Hydrophobicity Value -0.180
Molecular Weight (kDa) 30.0
Isoelectric Point (pI) 7.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000575 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_3946

Human Homologs

Ensembl 110, assembly GRCh38.p14
transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
E-value: 1.0e-35
Percent Identity: 35.0

References

No references are associated with this feature.