Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a46

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a46
Name
Replicon chromosome
Genomic location 54569 - 55348 (+ strand)

Cross-References

RefSeq YP_004351169.1
GI 330806707
Entrez 10468859
INSDC AEA66165.1
NCBI Locus Tag PSEBR_a46
UniParc UPI0002041FBA
UniProtKB Acc F2KAG6
UniProtKB ID F2KAG6_PSEBN
UniRef100 UniRef100_A0A0D0RCT4
UniRef50 UniRef50_Q4KKJ3
UniRef90 UniRef90_G8PX59

Product

Feature Type CDS
Coding Frame 1
Product Name
N-acetylmuramoyl-L-alanine amidase
Synonyms
Evidence for Translation
Charge (pH 7) 0.37
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 28.8
Isoelectric Point (pI) 7.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005025 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a46

Human Homologs

References

No references are associated with this feature.