Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a71

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a71
Name
Replicon chromosome
Genomic location 85874 - 86431 (- strand)

Cross-References

RefSeq YP_004351197.1
GI 330806735
Entrez 10468887
INSDC AEA66193.1
NCBI Locus Tag PSEBR_a71
UniParc UPI0002041FD5
UniProtKB Acc F2KAJ4
UniProtKB ID F2KAJ4_PSEBN
UniRef100 UniRef100_A0A0D0T833
UniRef50 UniRef50_Q88B46
UniRef90 UniRef90_Q4KKQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.11
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 20.7
Isoelectric Point (pI) 6.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000022 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a71

Human Homologs

Ensembl 110, assembly GRCh38.p14
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value: 7.9e-11
Percent Identity: 28.0

References

No references are associated with this feature.