Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a156

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a156
Name
Replicon	chromosome
Genomic location	179428 - 180609 (+ strand)

Cross-References

RefSeq	YP_004351293.1
GI	330806831
Entrez	10468983
INSDC	AEA66289.1
NCBI Locus Tag	PSEBR_a156
UniParc	UPI0002042034
UniProtKB Acc	F2KD27
UniProtKB ID	F2KD27_PSEBN
UniRef100	UniRef100_A0A0D0SUS5
UniRef50	UniRef50_Q92947
UniRef90	UniRef90_Q4KKG4

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.46
Kyte-Doolittle Hydrophobicity Value	-0.187
Molecular Weight (kDa)	43.2
Isoelectric Point (pI)	6.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 467 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000438 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a156 Search term: acyl-CoA dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000466845 glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189] E-value: 4.7e-146 Percent Identity: 65.1
Ensembl 110, assembly GRCh38.p14	ENSP00000222214 glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189] E-value: 4.7e-146 Percent Identity: 65.1

References