Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1266

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1266
Name
Replicon chromosome
Genomic location 1561932 - 1562711 (+ strand)

Cross-References

RefSeq YP_004352450.1
GI 330807988
Entrez 10470162
INSDC AEA67446.1
NCBI Locus Tag PSEBR_a1266
UniParc UPI0002041E15
UniProtKB Acc F2KD06
UniProtKB ID F2KD06_PSEBN
UniRef100 UniRef100_A0A0D0SW82
UniRef50 UniRef50_G8PXF6
UniRef90 UniRef90_G8PXF6

Product

Feature Type CDS
Coding Frame 1
Product Name
glutaconate CoA-transferase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value 0.040
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 220 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000226 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1266

Human Homologs

References

No references are associated with this feature.