Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1277

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1277
Name
Replicon chromosome
Genomic location 1573855 - 1577019 (- strand)

Cross-References

RefSeq YP_004352461.1
GI 330807999
Entrez 10470173
INSDC AEA67457.1
NCBI Locus Tag PSEBR_a1277
UniParc UPI0002041E20
UniProtKB Acc F2KDY0
UniProtKB ID F2KDY0_PSEBN
UniRef100 UniRef100_A0A0D0SQH5
UniRef50 UniRef50_P24177
UniRef90 UniRef90_Q4KH23

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.61
Kyte-Doolittle Hydrophobicity Value 0.290
Molecular Weight (kDa) 113.3
Isoelectric Point (pI) 6.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 760.8 41.59 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1277

Human Homologs

References

No references are associated with this feature.