Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1539

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1539
Name
Replicon	chromosome
Genomic location	1871222 - 1873048 (+ strand)

Cross-References

RefSeq	YP_004352740.1
GI	330808278
Entrez	10470454
INSDC	AEA67736.1
NCBI Locus Tag	PSEBR_a1539
UniParc	UPI000204136C
UniProtKB Acc	F2KEA0
UniProtKB ID	F2KEA0_PSEBN
UniRef100	UniRef100_A0A0D0TAE9
UniRef50	UniRef50_W9V3Q7
UniRef90	UniRef90_G8Q1Q3

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7)	5.30
Kyte-Doolittle Hydrophobicity Value	0.209
Molecular Weight (kDa)	66.6
Isoelectric Point (pI)	8.54

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000827 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1539 Search term: ABC transporter ATP-binding protein/permease

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000355637 ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41] E-value: 6.1e-44 Percent Identity: 27.0

References